Oceanographic influences on the distribution of Baltic cod, Gadus morhua, during spawning in the Bornholm Basin of the Baltic Sea

The Baltic Sea is a stratified, semienclosed sea typified by a low-salinity surface layer and a deep saline layer of varying volume, salinity, temperature and oxygen concentration. The relationships between these oceanographic factors and the distribution of Baltic cod are presented, utilizing results from a survey carried out during the 1995 spawning period in the Bornholm Basin, at present the main spawning area of this stock. Cod distribution, abundance and population structure were estimated from hydroacoustic and trawl data and related to hydrographic parameters as well as to bottom depth. In the central basin, cod were aggregated in an intermediate layer about 15 m thick. This area of peak abundance was defined at its upper limit by the halocline and at the lower limit by oxygen content. The majority of individuals caught in the basin centre were in spawning or pre-spawning condition with a high proportion of males to females. On the basin slopes, aggregations of cod were found near the bottom. These individuals were mainly immature and maturing stages with an increasing proportion of females to males with size. Salinity and oxygen conditions were found to be the major factors influencing the vertical and horizontal distribution of adult cod. Abundance of immature cod was also positively related to decreasing bottom depths. The effect of temperature was minor. The observed size- and sex-dependent spawning aggregation patterns, in association with habitat volume and stock size, may influence cod catchability and thereby the assessment and exploitation patterns of this stock.     

Effects of emulsified versus saline administration of GnRHa on induction of ovulation in rainbow trout, Oncorhynchus mykiss

The effects of saline-dissolved or Freund's incomplete adjuvant (FIA)-emulsified GnRHa treatment on the induction of ovulation in rainbow trout, Oncorhynchus mykiss, were examined. The FIA-emulsified GnRHa was first diluted in 0.25 ml physiological saline and then mixed with an equal volume of FIA. Fish were selected in the beginning of the spawning season and were allocated into four groups and were treated intraperitoneally with (a) 0.5 ml of emulsified GnRHa (GnRHa–FIA), (b) 0.5 ml saline-dissolved GnRHa in a single injection (GnRHa-1), (c) 0.5 ml saline-dissolved GnRHa in two injections spaced 1 d apart (GnRHa-2) and (d) 0.5 ml of saline (Control). The GnRHa dose in all hormone treatments was 25 µg kg^− 1. All fish in the FIA–GnRHa and GnRHa-2 groups ovulated within 10 and 11 d after treatment, respectively. In contrast, only 75% in the Control fish and 60% of the fish in the GnRHa-1 group ovulated within 36 d after treatment. None of the treatments caused any pre- or post-spawning mortality in the broodstock. Fertilization, eyeing and hatching percentages of the produced progeny were normal in all the treatment groups and did not differ significantly among them. In conclusion, FIA-emulsified GnRHa can be effective in advancing the onset of and synchronizing the ovulation of rainbow trout within a two-week period, thus shortening the egg collection period, without affecting broodstock survival and egg quality.     

赣江下游丰城江段鱼类早期资源现状调查

对赣江鱼类早期资源的调查,可为赣江鱼类资源保护以及水利工程生态调度提供科学依据.2017年5-7月,在赣江丰城段使用圆锥网采集鱼卵和弶网采集仔鱼,对鱼类早期资源种类组成、产卵规模和产卵场进行分析.结果显示,调查期间共采集鱼卵11215粒,仔鱼12645尾,隶属于4目、8科、36种,其中产漂流性卵鱼类24种.估算调查期间通过丰城段卵苗径流量为66.66×１０^８粒(尾),其中鱼卵径流量63.84×10^8 粒,鱼苗径流量2.82×10^8 尾;“四大家鱼”卵苗径流量为0.11×10^8 粒(尾),其中鱼卵径流量0.07×10^8 粒,鱼苗径流量0.04×10^8 尾.调查期间出现3次产卵高峰,集中在6 月上、中旬.各类群鱼卵数量呈现出不同的时间动态,银鮈(Squalidusargentatus)产卵高峰期主要出现在5月,银鲴(Xenocyprisargentea)、鳊(Parabramispekinensis)、赤眼鳟(Squaliobarbuscurriculus)以及“四大家鱼”则主要出现在6月.研究表明,峡江水利枢纽运行后,邻近峡江水利枢纽的巴邱“四大家鱼”产卵场消失,但其下游的仁和、新干产卵场保存较完整,在离坝较远的大洋洲镇江段新调查到一处“四大家鱼”产卵场.建议开展生态调度及增殖放流活动,以保护赣江鱼类资源.     

Livestock water productivity in mixed crop–livestock farming systems of the Blue Nile basin: Assessing variability and prospects for improvement

Water scarcity is a major factor limiting food production. Improving Livestock Water Productivity (LWP) is one of the approaches to address those problems. LWP is defined as the ratio of livestock’s beneficial outputs and services to water depleted in their production. Increasing LWP can help achieve more production per unit of water depleted. In this study we assess the spatial variability of LWP in three farming systems (rice-based, millet-based and barley-based) of the Gumera watershed in the highlands of the Blue Nile basin, Ethiopia. We collected data on land use, livestock management and climatic variables using focused group discussions, field observation and secondary data. We estimated the water depleted by evapotranspiration (ET) and beneficial animal products and services and then calculated LWP. Our results suggest that LWP is comparable with crop water productivity at watershed scales. Variability of LWP across farming systems of the Gumera watershed was apparent and this can be explained by farmers’ livelihood strategies and prevailing biophysical conditions. In view of the results there are opportunities to improve LWP: improved feed sourcing, enhancing livestock productivity and multiple livestock use strategies can help make animal production more water productive. Attempts to improve agricultural water productivity, at system scale, must recognize differences among systems and optimize resources use by system components.     

Distribution and spawning dynamics of capelin (Mallotus villosus) in Glacier Bay, Alaska: a cold water refugium

Pacific capelin (Mallotus villosus) populations declined dramatically in the Northeastern Pacific following ocean warming after the regime shift of 1977, but little is known about the cause of the decline or the functional relationships between capelin and their environment. We assessed the distribution and abundance of spawning, non‐spawning adult and larval capelin in Glacier Bay, an estuarine fjord system in southeastern Alaska. We used principal components analysis to analyze midwater trawl and beach seine data collected between 1999 and 2004 with respect to oceanographic data and other measures of physical habitat including proximity to tidewater glaciers and potential spawning habitat. Both spawning and non‐spawning adult Pacific capelin were more likely to occur in areas closest to tidewater glaciers, and those areas were distinguished by lower temperature, higher turbidity, higher dissolved oxygen and lower chlorophyll a levels when compared with other areas of the bay. The distribution of larval Pacific capelin was not sensitive to glacial influence. Pre‐spawning females collected farther from tidewater glaciers were at a lower maturity state than those sampled closer to tidewater glaciers, and the geographic variation in the onset of spawning is likely the result of differences in the marine habitat among sub‐areas of Glacier Bay. Proximity to cold water in Glacier Bay may have provided a refuge for capelin during the recent warm years in the Gulf of Alaska.     

Movement patterns of armado, Pterodoras granulosus, in the Paraná River Basin

Abstract –  We studied the migratory behaviour of armado, Pterodoras granulosus , in the Paraná River Basin of Brazil, Paraguay and Argentina, during 1997–2005. This species invaded the Upper Paraná River after upstream dispersal was facilitated when Itaipu Reservoir inundated a natural barrier. Fish were tagged ( N  = 8051) in the mainstems of the Yacyreta and Itaipu reservoirs, bays of major tributaries, the Paraná River floodplain above Itaipu Reservoir, and below dams. In all, 420 fish were recaptured of which 61% moved away from the release area. Fish moved a maximum of 215 km (mean 42), and at a maximum rate of 9.4 km·day⁻¹ (mean 0.6). Of the 256 armados that moved away from the release site, 145 moved upstream towards unimpounded stretches of the Paraná River and 111 moved downstream into the reservoir and bays of its tributaries (maximum 150 km). Based on the observed migratory movements, we suspect that most of the reproductive output originates in tributaries to the reservoirs. The ability of this species to expand its range presents a conundrum by pitting fishery management interests against conservation needs. Maintenance of the important armado fisheries depends on the ability of the species to migrate freely to use spawning and nursery areas in reservoir tributaries and floodplains. However, its ability to migrate long distances can allow this non-native species the opportunity to invade most of the Upper Paraná River.     

An empirical approach to target DNA quantification in environmental samples using real-time polymerase chain reactions

Recent advances in molecular techniques have allowed for the routine examination of nucleic acids in environmental samples. Although current methodologies are very sensitive, accurate target DNA quantification from environmental samples remains challenging. To facilitate high-throughput DNA quantification from environmental samples, we developed a novel DNA quantification method based on a non-linear curve-fitting approach to extract additional information from quantitative PCR amplification curves and used the fitted parameters to develop multiple regression standard equations for target DNA quantification. A 3-parameter sigmoidal function performed superior to a 4-parameter Weibull function for generating the multiple regression standard equations. In a verification experiment, target DNA was quantified in a series of ‘unknown’ samples in three soils using this approach and the results were compared to target DNA values determined using corrected and uncorrected Ct-based (threshold cycle) methods. For each method, the deviations from the expected target DNA content were determined. Results clearly showed that over all DNA concentrations, target DNA content determined by the non-linear curve-fitting method was more accurate and more precise than values predicted by all other methods. Analysis of variance conducted on the predicted DNA contents also revealed fewer statistical artifacts with the non-linear curve fitting method compared to the conventional Ct-based methods. The novel approach described here is accurate, inexpensive, and very amenable for automation and high-throughput applications.     

Integration of multiple soil parameters to evaluate soil quality: a field example

Development of a method to assess and monitor soil quality is critical to soil resource management and policy formation. To be useful, a method for assessing soil quality must be able to integrate many different kinds of data, allow evaluation of soil quality based on alternative uses or definitions and estimate soil quality for unsampled locations. In the present study we used one such method, based on non-parametric geostatistics. We evaluated soil quality from the integration of six soil variables measured at 220 locations in an agricultural field in southeastern Washington State. We converted the continous data values for each soil variable at each location to a binary variable indicator transform based on thresholds. We then combined indicator transformed data for individual soil variables into a single integrative indicator of soil quality termed a multiple variable indicator transform (MVIT). We observed that soil chemical variables, pools of soil resources, populations of microorgansims, and soil enzymes covaried spatially across the landscape. These ensembles of soil variables were not randomly distributed, but rather were systematically patterned. Soil quality maps calculated by kriging showed that the joint probabilities of meeting specific MVIT selection were influenced by the critical threshold values used to transform each individual soil quality variable and the MVIT selection criteria. If MVIT criteria adequately reflect soil quality then the kriging can produce maps of the probabilty of a soil being of good or poor quality.     

棉花SSR多重PCR技术的初步研究和利用

简单重复序列(simple sequences repeat,SSR)具有数量丰富、高度多态、共显性等优点,是一种极具实用价值的标记,目前已成为研究种质资源遗传多样性、基因组作图的首选标记.SSR多重PCR扩增法可同时完成多个标记检测,具有高效、经济、快捷的特点,并保持了单一SSR引物扩增的高度敏感性和准确性.本文选取6对SSR引物,配成三组SSR两重PCR反应,并设置五种不同反应体系以探索PCR反应体系对其影响,以单一引物PCR扩增为对照,对用于构建亚洲棉(Gossypium arboreum)遗传图谱所用的亲本、F1及F2群体单株的DNA模板进行多重PCR探索、分析;另外,在扩增产物的电泳检测时,结合银染技术,试验了单一引物PCR扩增产物在同一泳道同时上样和先后分时上样的两重检测的方法,以期对这种方法进行多态性位点检测的效果进行评价.结果表明,即使采用与单一引物PCR相同的反应体系,两重PCR扩增也可获得与之相同的多态性产物;而两重检测法的结果亦显示出与相应的单引物检测到的相应的多态性位点,能准确反映单引物所能达到的检测效果,因而为SSR的多重PCR和扩增后多重检测的技术在高效的遗传图谱构建工作中进一步应用提供实验依据.     

An index for evaluating the flood-prevention function of paddies

Urbanization is expanding in and around small to medium-sized cities as well as in large cities, and the expansion includes low-lying areas where the flood risk is high. Flood risk in small watersheds has been evaluated using precise mathematical models. However, these models cannot be applied to larger basins due to the complexity of data collection and analysis. As a result, quantitative evaluations of flood risk at macro scales and the flood-prevention function of paddies around urban areas have not been made. This paper proposes a method and an index that can be used to evaluate the flood-prevention function of paddies on a regional scale. In addition, the use of this system for basin-wide management is illustrated by an example for the Kinu and Kokai rivers, which are tributaries of the Tone River of Japan. The applicability of the approach is evaluated using data from a major flood that occurred in the study area.